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Ascalaph Designer
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Atomistix ToolKit and Virtual NanoLab
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CoNTub
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CP2K
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CST Studio Suite
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Deneb – graphical user interface (GUI) for SIESTA, VASP, QE, etc., DFT calculation packages
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Exabyte.io - a cloud-native integrated platform for nanoscale modeling, supporting simulations at multiple scales, including Density Functional Theory and Molecular Dynamics
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LAMMPS – Open source molecular dynamics code
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MAPS - Graphical user interface to build complex systems (nanostructures, polymers, surfaces...), set up and analyze ab-initio (Quantum Espresso, VASP, Abinit, NWChem...) or classical (LAMMPS, Towhee) simulations
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nanoHUB allows simulating geometry, electronic properties and electrical transport phenomena in various nanostructures
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Ninithi – carbon nanotube, graphene, and Fullerene modelling software
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Nanoengineer-1 – developed by company Nanorex, but the website doesn't work, may be unavailable
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NEMO 3-D – enables multi-million atom electronic structure simulations in empirical tight binding; open source; an educational version is on nanoHUB and Quantum Dot Lab
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Nanotube Modeler
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Materials Design MedeA
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Materials Studio
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Materials Square - a cloud-based materials simulation web platform, provides GUI for Quantum Espresso, LAMMPS, and Open Calphad
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MBN Explorer and MBN Studio
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MD-kMC
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PARCAS – Open source molecular dynamics code
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SAMSON: interactive carbon nanotube modeling and simulation
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Scigress
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TubeASP
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Tubegen
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Wrapping
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